Gene detail information of Glyur000056s00004127 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21720.2 | 6.00E-21 | |
| NR | XP_007148180.1 | 1.36E-41 | hypothetical protein PHAVU_006G187000g [Phaseolus vulgaris] |
| trEMBL | tr|V7BQD5|V7BQD5_PHAVU | 5.00E-42 | Uncharacterized protein {ECO:0000313|EMBL:ESW20174.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 150033 | 153085 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.518 |
| SRR1783600 | control | 2.615 |
| SRR1783602 | moderate drought stress | 0.901 |
| SRR1811619 | moderate drought stress | 0.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.911 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.875 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.939 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.138 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.331 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.669 |
| SRR2868004 | Drought Stress (root) | 5.069 |
| SRR2967015 | Control (root) | 5.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.134 |
| SRR9715740 | Leaf | 5.257 |
| SRR9715741 | Leaf | 3.998 |
| SRR9715739 | Root | 2.447 |
| SRR9715742 | Root | 3.100 |
| SRR9715743 | Root | 2.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.491 |
| SRR8749028 | MeJA induced 9h | 5.382 |
| SRR8749029 | MeJA induced 9h | 5.425 |
| SRR8749030 | Uninduced | 4.739 |
| SRR8749031 | Uninduced | 2.775 |
| SRR8749032 | Uninduced | 1.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.720 |
| SRR8400027 | Control - Root | 6.010 |