Gene detail information of Glyur000056s00004119 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_010943763.1 | 1.39E-10 | PREDICTED: uncharacterized protein LOC105061421 [Elaeis guineensis] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 120006 | 121616 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.267 |
| SRR1783600 | control | 44.927 |
| SRR1783602 | moderate drought stress | 37.500 |
| SRR1811619 | moderate drought stress | 37.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.037 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.181 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.788 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.537 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.111 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.190 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.277 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.790 |
| SRR2868004 | Drought Stress (root) | 11.871 |
| SRR2967015 | Control (root) | 9.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.257 |
| SRR9715740 | Leaf | 4.990 |
| SRR9715741 | Leaf | 8.078 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.716 |
| SRR9715743 | Root | 1.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.760 |
| SRR8749028 | MeJA induced 9h | 2.788 |
| SRR8749029 | MeJA induced 9h | 3.665 |
| SRR8749030 | Uninduced | 2.829 |
| SRR8749031 | Uninduced | 7.934 |
| SRR8749032 | Uninduced | 16.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.017 |
| SRR8400027 | Control - Root | 0.167 |