Gene detail information of Glyur000056s00004112 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09010.1 | 8.00E-16 | Protein kinase superfamily protein |
| NR | AFK33937.1 | 2.44E-46 | unknown [Lotus japonicus] |
| Swissprot | tr|C0LGH3|Y5614_ARATH | 5.00E-13 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (Precursor) |
| trEMBL | tr|I3S0Z5|I3S0Z5_LOTJA | 9.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:AFK33937.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 74288 | 78028 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.262 |
| SRR1783600 | control | 3.154 |
| SRR1783602 | moderate drought stress | 3.281 |
| SRR1811619 | moderate drought stress | 3.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.873 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.938 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.349 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.250 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.541 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.284 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.200 |
| SRR2868004 | Drought Stress (root) | 22.862 |
| SRR2967015 | Control (root) | 15.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.750 |
| SRR9715740 | Leaf | 5.473 |
| SRR9715741 | Leaf | 12.211 |
| SRR9715739 | Root | 0.570 |
| SRR9715742 | Root | 3.181 |
| SRR9715743 | Root | 3.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.113 |
| SRR8749028 | MeJA induced 9h | 27.274 |
| SRR8749029 | MeJA induced 9h | 21.562 |
| SRR8749030 | Uninduced | 39.008 |
| SRR8749031 | Uninduced | 30.392 |
| SRR8749032 | Uninduced | 29.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.105 |
| SRR8400027 | Control - Root | 9.841 |