Gene detail information of Glyur000056s00004100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G04980.1 | 2.00E-96 | |
| NR | XP_004485746.1 | 0 | PREDICTED: uncharacterized protein At4g04980-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q1PEB4|Y4498_ARATH | 1.00E-105 | Uncharacterized protein At4g04980 |
| trEMBL | tr|K7M1M7|K7M1M7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G31610.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 20028 | 23894 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.122 |
| SRR1783600 | control | 2.138 |
| SRR1783602 | moderate drought stress | 0.600 |
| SRR1811619 | moderate drought stress | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.330 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.098 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.095 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.145 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.589 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.939 |
| SRR2868004 | Drought Stress (root) | 14.785 |
| SRR2967015 | Control (root) | 7.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.198 |
| SRR9715740 | Leaf | 0.056 |
| SRR9715741 | Leaf | 0.147 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.784 |
| SRR8749028 | MeJA induced 9h | 60.575 |
| SRR8749029 | MeJA induced 9h | 26.370 |
| SRR8749030 | Uninduced | 51.186 |
| SRR8749031 | Uninduced | 91.667 |
| SRR8749032 | Uninduced | 19.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.144 |
| SRR8400027 | Control - Root | 0.734 |