Gene detail information of Glyur000056s00004099 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27430.2 | 3.00E-95 | COP1-interacting protein 7 |
| NR | XP_004485744.1 | 0 | PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum] |
| trEMBL | tr|V7BQC9|V7BQC9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW20197.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00056 | 11190 | 16556 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.175 |
| SRR1783600 | control | 54.477 |
| SRR1783602 | moderate drought stress | 63.764 |
| SRR1811619 | moderate drought stress | 63.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.031 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.244 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.464 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.372 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.019 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.833 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.710 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.294 |
| SRR2868004 | Drought Stress (root) | 32.285 |
| SRR2967015 | Control (root) | 34.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.539 |
| SRR9715740 | Leaf | 13.356 |
| SRR9715741 | Leaf | 14.940 |
| SRR9715739 | Root | 2.107 |
| SRR9715742 | Root | 12.748 |
| SRR9715743 | Root | 11.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.340 |
| SRR8749028 | MeJA induced 9h | 19.939 |
| SRR8749029 | MeJA induced 9h | 12.377 |
| SRR8749030 | Uninduced | 5.968 |
| SRR8749031 | Uninduced | 2.366 |
| SRR8749032 | Uninduced | 1.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.379 |
| SRR8400027 | Control - Root | 29.919 |