Gene detail information of Glyur000055s00004594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21570.1 | 1.00E-09 | |
| NR | XP_003550113.1 | 7.08E-51 | PREDICTED: uncharacterized protein LOC100780376 [Glycine max] |
| trEMBL | tr|I1MRC1|I1MRC1_SOYBN | 3.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G02410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 436559 | 437002 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000055s00004594.1 | PF15365.1 | PNRC | 100 | 146 | 1.40E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 238.869 |
| SRR1783600 | control | 231.771 |
| SRR1783602 | moderate drought stress | 167.422 |
| SRR1811619 | moderate drought stress | 147.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1061.163 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1045.677 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 99.297 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 137.908 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 747.531 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 735.486 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 151.386 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 142.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 207.172 |
| SRR2868004 | Drought Stress (root) | 495.973 |
| SRR2967015 | Control (root) | 761.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 90.173 |
| SRR9715740 | Leaf | 195.838 |
| SRR9715741 | Leaf | 134.009 |
| SRR9715739 | Root | 687.095 |
| SRR9715742 | Root | 515.400 |
| SRR9715743 | Root | 539.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 253.876 |
| SRR8749028 | MeJA induced 9h | 625.680 |
| SRR8749029 | MeJA induced 9h | 272.156 |
| SRR8749030 | Uninduced | 296.853 |
| SRR8749031 | Uninduced | 204.676 |
| SRR8749032 | Uninduced | 290.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 365.196 |
| SRR8400027 | Control - Root | 440.486 |