Gene detail information of Glyur000055s00004584 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18850.1 | 2.00E-23 | |
| NR | ACU19520.1 | 2.81E-41 | unknown [Glycine max] |
| trEMBL | tr|C6TCG8|C6TCG8_SOYBN | 1.00E-41 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU19520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 393124 | 393965 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.640 |
| SRR1783600 | control | 42.690 |
| SRR1783602 | moderate drought stress | 43.782 |
| SRR1811619 | moderate drought stress | 43.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.614 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.766 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.010 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.881 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.445 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.145 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.682 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.966 |
| SRR2868004 | Drought Stress (root) | 11.913 |
| SRR2967015 | Control (root) | 10.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.541 |
| SRR9715740 | Leaf | 7.593 |
| SRR9715741 | Leaf | 7.782 |
| SRR9715739 | Root | 9.206 |
| SRR9715742 | Root | 10.044 |
| SRR9715743 | Root | 8.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.258 |
| SRR8749028 | MeJA induced 9h | 6.153 |
| SRR8749029 | MeJA induced 9h | 5.308 |
| SRR8749030 | Uninduced | 6.915 |
| SRR8749031 | Uninduced | 3.295 |
| SRR8749032 | Uninduced | 6.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.731 |
| SRR8400027 | Control - Root | 19.453 |