Gene detail information of Glyur000055s00004569 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15563.1 | 2.00E-33 | |
| NR | NP_001239747.1 | 3.71E-92 | uncharacterized protein LOC100793622 [Glycine max] |
| trEMBL | tr|C6TCL9|C6TCL9_SOYBN | 1.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G38120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 295317 | 297046 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.391 |
| SRR1783600 | control | 4.212 |
| SRR1783602 | moderate drought stress | 8.030 |
| SRR1811619 | moderate drought stress | 8.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.600 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.221 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.375 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.194 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.311 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.753 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.426 |
| SRR2868004 | Drought Stress (root) | 29.481 |
| SRR2967015 | Control (root) | 27.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.380 |
| SRR9715740 | Leaf | 14.293 |
| SRR9715741 | Leaf | 12.767 |
| SRR9715739 | Root | 7.566 |
| SRR9715742 | Root | 6.365 |
| SRR9715743 | Root | 5.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.664 |
| SRR8749028 | MeJA induced 9h | 13.994 |
| SRR8749029 | MeJA induced 9h | 13.499 |
| SRR8749030 | Uninduced | 12.595 |
| SRR8749031 | Uninduced | 34.476 |
| SRR8749032 | Uninduced | 22.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.146 |
| SRR8400027 | Control - Root | 12.382 |