Gene detail information of Glyur000055s00004553 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18600.1 | 7.00E-48 | Thioredoxin superfamily protein |
| NR | XP_006584039.1 | 4.92E-66 | PREDICTED: monothiol glutaredoxin-S2-like [Glycine max] |
| COG | YP_003952551.1 | 8.00E-08 | glutaredoxin [Stigmatella aurantiaca DW4/3-1] |
| Swissprot | tr|Q8L8Z8|GRXS2_ARATH | 5.00E-61 | Monothiol glutaredoxin-S2 |
| trEMBL | tr|I1KN22|I1KN22_SOYBN | 2.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G38030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 203886 | 204194 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000055s00004553.1 | PF00462.19 | Glutaredoxin | 13 | 75 | 5.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.312 |
| SRR1783600 | control | 14.744 |
| SRR1783602 | moderate drought stress | 21.291 |
| SRR1811619 | moderate drought stress | 21.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.747 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.484 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.773 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.651 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.796 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.093 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.372 |
| SRR2868004 | Drought Stress (root) | 0.765 |
| SRR2967015 | Control (root) | 1.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.795 |
| SRR9715740 | Leaf | 37.001 |
| SRR9715741 | Leaf | 19.575 |
| SRR9715739 | Root | 20.572 |
| SRR9715742 | Root | 70.424 |
| SRR9715743 | Root | 47.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.233 |
| SRR8749028 | MeJA induced 9h | 0.280 |
| SRR8749029 | MeJA induced 9h | 0.197 |
| SRR8749030 | Uninduced | 1.266 |
| SRR8749031 | Uninduced | 1.519 |
| SRR8749032 | Uninduced | 1.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.575 |
| SRR8400027 | Control - Root | 0.495 |