Gene detail information of Glyur000055s00004526 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47820.2 | 3.00E-92 | |
| NR | XP_006584031.1 | 0 | PREDICTED: uncharacterized protein LOC100809377 [Glycine max] |
| trEMBL | tr|I1KN07|I1KN07_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G37810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 23933 | 29455 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.381 |
| SRR1783600 | control | 4.464 |
| SRR1783602 | moderate drought stress | 4.961 |
| SRR1811619 | moderate drought stress | 4.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.184 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.323 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.989 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.713 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.957 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.739 |
| SRR2868004 | Drought Stress (root) | 5.173 |
| SRR2967015 | Control (root) | 4.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.264 |
| SRR9715740 | Leaf | 6.368 |
| SRR9715741 | Leaf | 6.096 |
| SRR9715739 | Root | 0.979 |
| SRR9715742 | Root | 5.873 |
| SRR9715743 | Root | 4.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.593 |
| SRR8749028 | MeJA induced 9h | 13.402 |
| SRR8749029 | MeJA induced 9h | 11.536 |
| SRR8749030 | Uninduced | 5.932 |
| SRR8749031 | Uninduced | 8.752 |
| SRR8749032 | Uninduced | 7.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.772 |
| SRR8400027 | Control - Root | 4.571 |