Gene detail information of Glyur000055s00004519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16510.1 | 3.00E-30 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | XP_004508275.1 | 1.58E-89 | PREDICTED: uncharacterized protein LOC101495376 [Cicer arietinum] |
| trEMBL | tr|V7C7X1|V7C7X1_PHAVU | 1.00E-82 | Uncharacterized protein {ECO:0000313|EMBL:ESW26262.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 11178 | 12020 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000055s00004519.1 | PF00168.25 | C2 | 6 | 94 | 2.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.550 |
| SRR1783600 | control | 12.959 |
| SRR1783602 | moderate drought stress | 12.896 |
| SRR1811619 | moderate drought stress | 12.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.186 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.466 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.252 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.245 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 107.250 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 109.157 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.994 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.526 |
| SRR2868004 | Drought Stress (root) | 13.933 |
| SRR2967015 | Control (root) | 19.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.263 |
| SRR9715740 | Leaf | 28.909 |
| SRR9715741 | Leaf | 30.296 |
| SRR9715739 | Root | 545.965 |
| SRR9715742 | Root | 273.718 |
| SRR9715743 | Root | 320.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 97.525 |
| SRR8749028 | MeJA induced 9h | 136.347 |
| SRR8749029 | MeJA induced 9h | 134.802 |
| SRR8749030 | Uninduced | 103.410 |
| SRR8749031 | Uninduced | 46.521 |
| SRR8749032 | Uninduced | 73.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.929 |
| SRR8400027 | Control - Root | 45.287 |