Gene detail information of Glyur000054s00005315 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20390.1 | 5.00E-39 | |
| NR | XP_006603735.1 | 3.71E-76 | PREDICTED: uncharacterized protein LOC100813252 isoform X1 [Glycine max] |
| trEMBL | tr|I1N9V0|I1N9V0_SOYBN | 1.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G35170.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00054 | 92255 | 93877 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000054s00005315.1 | PF08695.5 | Coa1 | 1 | 64 | 1.70E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.492 |
| SRR1783600 | control | 12.594 |
| SRR1783602 | moderate drought stress | 9.178 |
| SRR1811619 | moderate drought stress | 9.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.298 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.839 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.607 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.786 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.270 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.610 |
| SRR2868004 | Drought Stress (root) | 11.098 |
| SRR2967015 | Control (root) | 12.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.705 |
| SRR9715740 | Leaf | 27.008 |
| SRR9715741 | Leaf | 45.626 |
| SRR9715739 | Root | 6.446 |
| SRR9715742 | Root | 12.880 |
| SRR9715743 | Root | 9.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.246 |
| SRR8749028 | MeJA induced 9h | 8.977 |
| SRR8749029 | MeJA induced 9h | 7.502 |
| SRR8749030 | Uninduced | 6.935 |
| SRR8749031 | Uninduced | 2.836 |
| SRR8749032 | Uninduced | 4.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.893 |
| SRR8400027 | Control - Root | 16.004 |