Gene detail information of Glyur000054s00005306 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04040.1 | 4.00E-82 | HAD superfamily, subfamily IIIB acid phosphatase |
| NR | XP_003521307.1 | 1.30E-149 | PREDICTED: acid phosphatase 1-like [Glycine max] |
| COG | YP_004217721.1 | 8.00E-24 | acid phosphatase (class B) [Granulicella tundricola MP5ACTX9] |
| Swissprot | tr|P27061|PPA1_SOLLC | 2.00E-60 | Acid phosphatase 1 (Precursor) |
| trEMBL | tr|I1JP67|I1JP67_SOYBN | 5.00E-150 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G32360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00054 | 39098 | 41729 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000054s00005306.1 | PF03767.9 | Acid_phosphat_B | 41 | 260 | 3.50E-65 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.272 |
| SRR1783600 | control | 60.366 |
| SRR1783602 | moderate drought stress | 22.805 |
| SRR1811619 | moderate drought stress | 22.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.655 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.228 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.742 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.710 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.401 |
| SRR2868004 | Drought Stress (root) | 13.144 |
| SRR2967015 | Control (root) | 22.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.101 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.455 |
| SRR9715739 | Root | 16.185 |
| SRR9715742 | Root | 5.759 |
| SRR9715743 | Root | 8.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 64.756 |
| SRR8400027 | Control - Root | 71.477 |