Gene detail information of Glyur000053s00006490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39970.1 | 5.00E-127 | Mitochondrial substrate carrier family protein |
| NR | XP_003552504.1 | 0 | PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier-like isoform X1 [Glycine max] |
| Swissprot | tr|O04200|PXN_ARATH | 3.00E-161 | Peroxisomal nicotinamide adenine dinucleotide carrier |
| trEMBL | tr|I1MZ50|I1MZ50_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 423811 | 429024 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000053s00006490.1 | PF00153.22 | Mito_carr | 5 | 90 | 5.10E-16 |
| Glyur000053s00006490.1 | PF00153.22 | Mito_carr | 108 | 221 | 4.10E-18 |
| Glyur000053s00006490.1 | PF00153.22 | Mito_carr | 232 | 321 | 1.10E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.874 |
| SRR1783600 | control | 17.916 |
| SRR1783602 | moderate drought stress | 12.338 |
| SRR1811619 | moderate drought stress | 12.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.693 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.280 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.677 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.839 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.368 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.139 |
| SRR2868004 | Drought Stress (root) | 25.052 |
| SRR2967015 | Control (root) | 24.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.948 |
| SRR9715740 | Leaf | 8.443 |
| SRR9715741 | Leaf | 12.149 |
| SRR9715739 | Root | 5.708 |
| SRR9715742 | Root | 10.340 |
| SRR9715743 | Root | 8.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.837 |
| SRR8749028 | MeJA induced 9h | 25.632 |
| SRR8749029 | MeJA induced 9h | 43.383 |
| SRR8749030 | Uninduced | 20.528 |
| SRR8749031 | Uninduced | 20.150 |
| SRR8749032 | Uninduced | 19.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.371 |
| SRR8400027 | Control - Root | 35.362 |