Gene detail information of Glyur000053s00006475 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19615.1 | 4.00E-10 | |
| NR | KEH44021.1 | 3.30E-51 | hypothetical protein MTR_1g106215 [Medicago truncatula] |
| trEMBL | tr|A0A072VQS7|A0A072VQS7_MEDTR | 1.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:KEH44021.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 350195 | 350533 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.666 |
| SRR1783600 | control | 9.860 |
| SRR1783602 | moderate drought stress | 11.760 |
| SRR1811619 | moderate drought stress | 11.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 273.513 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 265.986 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.685 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.815 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 530.744 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 543.541 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.210 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.130 |
| SRR2868004 | Drought Stress (root) | 67.908 |
| SRR2967015 | Control (root) | 113.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 109.974 |
| SRR9715740 | Leaf | 67.912 |
| SRR9715741 | Leaf | 193.620 |
| SRR9715739 | Root | 98.302 |
| SRR9715742 | Root | 149.633 |
| SRR9715743 | Root | 107.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 856.673 |
| SRR8749028 | MeJA induced 9h | 1199.259 |
| SRR8749029 | MeJA induced 9h | 1586.313 |
| SRR8749030 | Uninduced | 1845.176 |
| SRR8749031 | Uninduced | 1230.092 |
| SRR8749032 | Uninduced | 2090.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.344 |
| SRR8400027 | Control - Root | 57.109 |