Gene detail information of Glyur000053s00006454 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49870.2 | 2.00E-123 | |
| NR | XP_004496890.1 | 0 | PREDICTED: uncharacterized protein LOC101495113 [Cicer arietinum] |
| trEMBL | tr|A0A072VPU0|A0A072VPU0_MEDTR | 0 | Transporter-like protein, putative {ECO:0000313|EMBL:KEH44034.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 223449 | 225902 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.734 |
| SRR1783600 | control | 0.768 |
| SRR1783602 | moderate drought stress | 0.777 |
| SRR1811619 | moderate drought stress | 0.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.689 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.716 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.210 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.205 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.349 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.247 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.972 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.888 |
| SRR2868004 | Drought Stress (root) | 5.088 |
| SRR2967015 | Control (root) | 6.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.716 |
| SRR9715740 | Leaf | 1.253 |
| SRR9715741 | Leaf | 3.151 |
| SRR9715739 | Root | 0.221 |
| SRR9715742 | Root | 1.641 |
| SRR9715743 | Root | 1.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.948 |
| SRR8749028 | MeJA induced 9h | 7.975 |
| SRR8749029 | MeJA induced 9h | 7.565 |
| SRR8749030 | Uninduced | 0.875 |
| SRR8749031 | Uninduced | 1.395 |
| SRR8749032 | Uninduced | 1.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.301 |
| SRR8400027 | Control - Root | 6.905 |