Gene detail information of Glyur000053s00006440 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G14910.1 | 1.00E-114 | |
| NR | XP_004496909.1 | 0 | PREDICTED: uncharacterized protein LOC101500430 [Cicer arietinum] |
| trEMBL | tr|I1LEH3|I1LEH3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G40620.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 140363 | 147991 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000053s00006440.1 | PF05542.6 | DUF760 | 181 | 263 | 7.80E-22 |
| Glyur000053s00006440.1 | PF05542.6 | DUF760 | 363 | 489 | 2.30E-25 |
| Glyur000053s00006440.2 | PF05542.6 | DUF760 | 76 | 158 | 5.40E-22 |
| Glyur000053s00006440.2 | PF05542.6 | DUF760 | 258 | 384 | 1.60E-25 |
| Glyur000053s00006440.3 | PF05542.6 | DUF760 | 76 | 158 | 5.40E-22 |
| Glyur000053s00006440.3 | PF05542.6 | DUF760 | 258 | 384 | 1.60E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 162.112 |
| SRR1783600 | control | 162.336 |
| SRR1783602 | moderate drought stress | 169.682 |
| SRR1811619 | moderate drought stress | 169.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 165.427 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 163.405 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.425 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 70.949 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 95.819 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 95.432 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 56.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 55.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.933 |
| SRR2868004 | Drought Stress (root) | 57.795 |
| SRR2967015 | Control (root) | 53.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 78.703 |
| SRR9715740 | Leaf | 86.823 |
| SRR9715741 | Leaf | 95.888 |
| SRR9715739 | Root | 49.318 |
| SRR9715742 | Root | 99.007 |
| SRR9715743 | Root | 89.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.513 |
| SRR8749028 | MeJA induced 9h | 48.721 |
| SRR8749029 | MeJA induced 9h | 36.874 |
| SRR8749030 | Uninduced | 74.737 |
| SRR8749031 | Uninduced | 93.143 |
| SRR8749032 | Uninduced | 96.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 100.007 |
| SRR8400027 | Control - Root | 106.008 |