Gene detail information of Glyur000053s00006430 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19500.1 | 6.00E-38 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004496926.1 | 5.35E-120 | PREDICTED: transcription factor bHLH113-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9LT67|BH113_ARATH | 1.00E-52 | Transcription factor bHLH113 |
| trEMBL | tr|A0A072W1A5|A0A072W1A5_MEDTR | 2.00E-111 | BHLH transcription factor-like protein {ECO:0000313|EMBL:KEH44065.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 101371 | 102936 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.155 |
| SRR1783600 | control | 0.049 |
| SRR1783602 | moderate drought stress | 0.025 |
| SRR1811619 | moderate drought stress | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.274 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.291 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.590 |
| SRR2868004 | Drought Stress (root) | 0.989 |
| SRR2967015 | Control (root) | 0.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.243 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.161 |
| SRR9715739 | Root | 0.003 |
| SRR9715742 | Root | 0.010 |
| SRR9715743 | Root | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 72.326 |
| SRR8749028 | MeJA induced 9h | 6.808 |
| SRR8749029 | MeJA induced 9h | 18.848 |
| SRR8749030 | Uninduced | 0.190 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.024 |
| SRR8400027 | Control - Root | 0.066 |