Gene detail

Gene detail information of Glyur000053s00006421.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G15480.1	9.00E-143	UDP-Glycosyltransferase superfamily protein
NR	XP_003555960.1	0	PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
COG	YP_007421411.1	1.00E-10	Glycosyltransferase, MGT [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprot	tr\|Q2V6K1\|UGT_FRAAN	0	Putative UDP-glucose glucosyltransferase
trEMBL	tr\|I1NFW9\|I1NFW9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G26420.1}

Sequence

Transcript Sequence

>Glyur000053s00006421.1
ATGGGGTCTGAATCTGAATCTCCCGTTCACATCCTCCTTGTATCTTATCCAGCACAAGGGCACATAAACCCTCTACTTAGACTAGGCAAGTGTCTTGCTGCAAAGGGTTCCTTTGTCATCTTTGTTACCACAGAGAAAGCTGGCAAAGACATGCGAAGTGCTAACAACATCACTGACAAATCGGCCACCCCAGTTGGTGATGGTTTTCTCATGTTCGAGTTCTTTGAAGATGGTTTGGCAGATGATGATCCCGCCAGAGCAAGTCTCAGTGACTACTCAGCACAGCTTGAGCTTGTTGGGAAACAACATGTTTCCCAAATGATCAAGAACCATGCTGGGTCAAACACACCAATTTCCTGTGTCATAAACAACCCTTTTCTTCCATGGGTCTGTGATGTAGCCGCTGAACATGGGATTCCCTCTGCTCTGATGTGGATTCAATCCAGTGCTGTCTTCACCGCTTACTACAACTATTTCCACAAACTGGTACGTTTCCCTTCAGATGCAGAGCCTTACATTGATGTTCAATTGCCTTCTTTAGTCCTTAAATACAATGAAATCCCAGACTTTCTGCATCCTTTTAGCCCATACCCATTTCTTGGGACACTCATCTTGGAACAATTCAAGAACTTGTCTAAAGCATTCTGTGTATTGGTGGACACCTATGAGGAACTAGAGCGTGATTTCATTGACCATGTTTCAAAGTTTGTCCTCATGAGGCCTGTTGGGCCTCTGTTCAAGAACCAGAAAGCAACAGCCACAAGCAATAATATCCGTGGTGATTTCGTCAAGAGCGATGATTGTATCGAGTGGCTAAACTCAAGGTCCCCAGCATCTGTGGTGTATATCTCCTTTGGCAGTATTGTGCATCTGCCTCAAGAACAAGTGGATGAAATTGCCTATGGCCTATTGAGCTCTAAAGTNTCGTTTTTGTGGGTACTAAAACCACCTCTTAAGNACATGGGGCGCGCTCCCCATGTTCTGCCAGATGGGTTCTTTGAGGAAACCAGTGGGAAGGGCAAAGTGGTGCAGTGGAGTCCACAAGAAGAAGTACTGGCTCACCCTTCGGTGGCATGCTTCCTGACACATTGTGGCTGGAACTCATCCATGGAAGCACTCACTTTGGGGGTGCCCATGTTGACATTTCCAGCATGGGGTGACCAAGTCACAAACGCAAAGTTCTTGGTAGATGTTTTTGGGGTGGGGATTAGATTGGGTTATAGCCAGGCTGAAAACAAAGTGGTCAATAGAGATGAGGTGAAGAAGTGCTTGTTGGAAGCAACAGTTGGGCCAAAAGCAGAGGAGTTGAAGCAAAACGCATTGAAGTGGAAGAAGGCAGCGGAGGCCGCAGTTGCCGTCGGTGGCTCCTCTGATCGGCATCTTGATGAATTCATAGCAGATATTAAGAAACGTGGCGCTGTTAAATTTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00053	57378	58808	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000053s00006421.1	PF00201.13	UDPGT	244	400	1.20E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.558
SRR1783600	control	17.719
SRR1783602	moderate drought stress	15.814
SRR1811619	moderate drought stress	15.955

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.159
DRR006520	Root Summer glycyrrhizin high producing strain	3.096
DRR006521	Root Winter glycyrrhizin high producing strain	11.784
DRR006522	Root Winter glycyrrhizin high producing strain	11.646
DRR006523	Root Summer glycyrrhizin low producing strain	6.779
DRR006524	Root Summer glycyrrhizin low producing strain	6.859
DRR006525	Leaf Summer glycyrrhizin high producing strain	47.581
DRR006526	Leaf Summer glycyrrhizin high producing strain	47.151

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.224
SRR2868004	Drought Stress (root)	19.945
SRR2967015	Control (root)	14.134

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	43.126
SRR9715740	Leaf	46.889
SRR9715741	Leaf	38.053
SRR9715739	Root	33.753
SRR9715742	Root	18.687
SRR9715743	Root	21.739

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.136
SRR8749028	MeJA induced 9h	4.398
SRR8749029	MeJA induced 9h	2.087
SRR8749030	Uninduced	8.882
SRR8749031	Uninduced	3.433
SRR8749032	Uninduced	2.200

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.587
SRR8400027	Control - Root	24.730