Gene detail information of Glyur000052s00005810 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72750.1 | 3.00E-57 | translocase inner membrane subunit 23-2 |
| NR | XP_004510416.1 | 9.70E-101 | PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2-like [Cicer arietinum] |
| Swissprot | tr|Q38820|TI232_ARATH | 1.00E-78 | Mitochondrial import inner membrane translocase subunit TIM23-2 |
| trEMBL | tr|I1M595|I1M595_SOYBN | 1.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G42300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 430318 | 430884 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000052s00005810.1 | PF02466.14 | Tim17 | 55 | 180 | 1.80E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 64.413 |
| SRR1783600 | control | 60.887 |
| SRR1783602 | moderate drought stress | 72.926 |
| SRR1811619 | moderate drought stress | 68.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 72.280 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 72.684 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.351 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.830 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 109.730 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 113.111 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.695 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.369 |
| SRR2868004 | Drought Stress (root) | 38.441 |
| SRR2967015 | Control (root) | 32.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 68.944 |
| SRR9715740 | Leaf | 71.206 |
| SRR9715741 | Leaf | 62.378 |
| SRR9715739 | Root | 105.529 |
| SRR9715742 | Root | 87.670 |
| SRR9715743 | Root | 93.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.510 |
| SRR8749028 | MeJA induced 9h | 26.161 |
| SRR8749029 | MeJA induced 9h | 24.151 |
| SRR8749030 | Uninduced | 11.295 |
| SRR8749031 | Uninduced | 4.788 |
| SRR8749032 | Uninduced | 15.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.974 |
| SRR8400027 | Control - Root | 47.480 |