Gene detail information of Glyur000052s00005800 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72640.1 | 3.00E-71 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_003548797.1 | 1.09E-150 | PREDICTED: uncharacterized protein LOC100806043 [Glycine max] |
| COG | YP_007053644.1 | 4.00E-06 | NmrA-like family protein [Rivularia sp. PCC 7116] |
| trEMBL | tr|I1MJX7|I1MJX7_SOYBN | 4.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G00670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 331273 | 336131 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000052s00005800.1 | PF13460.1 | NAD_binding_10 | 166 | 279 | 4.50E-08 |
| Glyur000052s00005800.2 | PF13460.1 | NAD_binding_10 | 9 | 154 | 6.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.021 |
| SRR1783600 | control | 1.141 |
| SRR1783602 | moderate drought stress | 2.044 |
| SRR1811619 | moderate drought stress | 1.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.860 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.042 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.938 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.151 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.678 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.662 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.422 |
| SRR2868004 | Drought Stress (root) | 4.893 |
| SRR2967015 | Control (root) | 3.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.012 |
| SRR9715740 | Leaf | 20.726 |
| SRR9715741 | Leaf | 12.965 |
| SRR9715739 | Root | 0.175 |
| SRR9715742 | Root | 0.595 |
| SRR9715743 | Root | 0.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.271 |
| SRR8749028 | MeJA induced 9h | 1.094 |
| SRR8749029 | MeJA induced 9h | 0.719 |
| SRR8749030 | Uninduced | 0.623 |
| SRR8749031 | Uninduced | 0.716 |
| SRR8749032 | Uninduced | 0.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.153 |
| SRR8400027 | Control - Root | 3.256 |