Gene detail information of Glyur000052s00005785 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54200.1 | 8.00E-32 | |
| NR | KHN39643.1 | 3.62E-176 | hypothetical protein glysoja_020721 [Glycine soja] |
| trEMBL | tr|I1MJY9|I1MJY9_SOYBN | 9.00E-175 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G00820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 241069 | 242358 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.821 |
| SRR1783600 | control | 3.834 |
| SRR1783602 | moderate drought stress | 6.177 |
| SRR1811619 | moderate drought stress | 5.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.531 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.003 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.902 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.075 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.175 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.712 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.097 |
| SRR2868004 | Drought Stress (root) | 30.729 |
| SRR2967015 | Control (root) | 37.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.682 |
| SRR9715740 | Leaf | 5.340 |
| SRR9715741 | Leaf | 4.430 |
| SRR9715739 | Root | 6.383 |
| SRR9715742 | Root | 14.217 |
| SRR9715743 | Root | 10.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.052 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.045 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.315 |
| SRR8400027 | Control - Root | 27.711 |