Gene detail information of Glyur000052s00005780 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72650.2 | 4.00E-99 | TRF-like 6 |
| NR | KEH18465.1 | 0 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9M347|TRP6_ARATH | 2.00E-10 | Telomere repeat-binding protein 6 |
| trEMBL | tr|A0A072TY48|A0A072TY48_MEDTR | 0 | Myb transcription factor {ECO:0000313|EMBL:KEH18465.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 180125 | 187455 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.727 |
| SRR1783600 | control | 6.779 |
| SRR1783602 | moderate drought stress | 7.560 |
| SRR1811619 | moderate drought stress | 7.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.576 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.416 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.212 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.329 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.339 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.003 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.610 |
| SRR2868004 | Drought Stress (root) | 18.919 |
| SRR2967015 | Control (root) | 20.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.988 |
| SRR9715740 | Leaf | 14.680 |
| SRR9715741 | Leaf | 18.001 |
| SRR9715739 | Root | 1.931 |
| SRR9715742 | Root | 10.485 |
| SRR9715743 | Root | 7.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.235 |
| SRR8749028 | MeJA induced 9h | 42.371 |
| SRR8749029 | MeJA induced 9h | 32.697 |
| SRR8749030 | Uninduced | 14.384 |
| SRR8749031 | Uninduced | 13.811 |
| SRR8749032 | Uninduced | 18.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.687 |
| SRR8400027 | Control - Root | 22.363 |