Gene detail information of Glyur000052s00005765 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54215.1 | 5.00E-05 | proline-rich family protein |
| NR | XP_004510464.1 | 7.71E-41 | PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3-like [Cicer arietinum] |
| trEMBL | tr|I1MK02|I1MK02_SOYBN | 1.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G00960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 87410 | 87895 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.710 |
| SRR1783600 | control | 20.430 |
| SRR1783602 | moderate drought stress | 31.102 |
| SRR1811619 | moderate drought stress | 31.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.758 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.545 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.117 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.513 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.198 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 58.169 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.190 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.276 |
| SRR2868004 | Drought Stress (root) | 19.775 |
| SRR2967015 | Control (root) | 21.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.112 |
| SRR9715740 | Leaf | 23.298 |
| SRR9715741 | Leaf | 22.770 |
| SRR9715739 | Root | 76.768 |
| SRR9715742 | Root | 54.038 |
| SRR9715743 | Root | 54.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 128.098 |
| SRR8749028 | MeJA induced 9h | 108.493 |
| SRR8749029 | MeJA induced 9h | 153.388 |
| SRR8749030 | Uninduced | 119.273 |
| SRR8749031 | Uninduced | 94.928 |
| SRR8749032 | Uninduced | 143.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.887 |
| SRR8400027 | Control - Root | 40.273 |