Gene detail information of Glyur000052s00005750 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006385515.1 | 7.94E-54 | hypothetical protein POPTR_0003s06410g [Populus trichocarpa] |
| trEMBL | tr|U5GPU7|U5GPU7_POPTR | 3.00E-54 | Uncharacterized protein {ECO:0000313|EMBL:ERP63312.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 19873 | 20247 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 128.657 |
| SRR1783600 | control | 127.428 |
| SRR1783602 | moderate drought stress | 46.378 |
| SRR1811619 | moderate drought stress | 46.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.255 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.384 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.662 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.078 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.623 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.318 |
| SRR2868004 | Drought Stress (root) | 7.799 |
| SRR2967015 | Control (root) | 4.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.413 |
| SRR9715740 | Leaf | 35.252 |
| SRR9715741 | Leaf | 22.592 |
| SRR9715739 | Root | 28.838 |
| SRR9715742 | Root | 27.404 |
| SRR9715743 | Root | 29.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.171 |
| SRR8749028 | MeJA induced 9h | 5.309 |
| SRR8749029 | MeJA induced 9h | 11.064 |
| SRR8749030 | Uninduced | 20.371 |
| SRR8749031 | Uninduced | 3.381 |
| SRR8749032 | Uninduced | 8.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.554 |
| SRR8400027 | Control - Root | 14.165 |