Gene detail information of Glyur000051s00003461 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G33760.1 | 5.00E-04 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003610926.1 | 3.12E-29 | Ethylene-responsive transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9C9I2|ERF21_ARATH | 5.00E-06 | Ethylene-responsive transcription factor ERF021 |
| trEMBL | tr|G7K7X9|G7K7X9_MEDTR | 1.00E-29 | Ethylene response factor {ECO:0000313|EMBL:AES93884.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 436948 | 437235 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.957 |
| SRR1783600 | control | 0.885 |
| SRR1783602 | moderate drought stress | 0.527 |
| SRR1811619 | moderate drought stress | 0.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.837 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.435 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.916 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.397 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.597 |
| SRR2868004 | Drought Stress (root) | 1.135 |
| SRR2967015 | Control (root) | 0.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.902 |
| SRR9715740 | Leaf | 0.367 |
| SRR9715741 | Leaf | 0.239 |
| SRR9715739 | Root | 0.023 |
| SRR9715742 | Root | 0.876 |
| SRR9715743 | Root | 0.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.458 |
| SRR8749028 | MeJA induced 9h | 2.722 |
| SRR8749029 | MeJA induced 9h | 4.102 |
| SRR8749030 | Uninduced | 0.221 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.369 |
| SRR8400027 | Control - Root | 0.994 |