Gene detail information of Glyur000051s00003460 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G33760.1 | 1.00E-14 | Integrase-type DNA-binding superfamily protein |
| NR | KHN25590.1 | 3.00E-40 | Ethylene-responsive transcription factor ERF021 [Glycine soja] |
| Swissprot | tr|Q9LQ28|ERF22_ARATH | 3.00E-23 | Ethylene-responsive transcription factor ERF022 |
| trEMBL | tr|G7K7X6|G7K7X6_MEDTR | 3.00E-39 | Ethylene response factor {ECO:0000313|EMBL:AES93881.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 422812 | 423267 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.516 |
| SRR1783600 | control | 0.581 |
| SRR1783602 | moderate drought stress | 0.071 |
| SRR1811619 | moderate drought stress | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.604 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.148 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.500 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.612 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.028 |
| SRR2868004 | Drought Stress (root) | 13.540 |
| SRR2967015 | Control (root) | 10.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.872 |
| SRR9715740 | Leaf | 4.510 |
| SRR9715741 | Leaf | 1.422 |
| SRR9715739 | Root | 163.199 |
| SRR9715742 | Root | 49.351 |
| SRR9715743 | Root | 72.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.010 |
| SRR8749028 | MeJA induced 9h | 0.604 |
| SRR8749029 | MeJA induced 9h | 0.674 |
| SRR8749030 | Uninduced | 1.509 |
| SRR8749031 | Uninduced | 0.824 |
| SRR8749032 | Uninduced | 7.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.994 |
| SRR8400027 | Control - Root | 12.122 |