Gene detail information of Glyur000051s00003446 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17170.1 | 2.00E-59 | rubredoxin family protein |
| NR | AFK49465.1 | 1.03E-119 | unknown [Lotus japonicus] |
| trEMBL | tr|I3TAC3|I3TAC3_LOTJA | 4.00E-120 | Uncharacterized protein {ECO:0000313|EMBL:AFK49465.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 347023 | 351527 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.011 |
| SRR1783600 | control | 1.001 |
| SRR1783602 | moderate drought stress | 3.106 |
| SRR1811619 | moderate drought stress | 3.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.396 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.877 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.984 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.994 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.616 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 518.121 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 519.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.833 |
| SRR2868004 | Drought Stress (root) | 12.910 |
| SRR2967015 | Control (root) | 5.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 362.756 |
| SRR9715740 | Leaf | 582.888 |
| SRR9715741 | Leaf | 370.107 |
| SRR9715739 | Root | 3.773 |
| SRR9715742 | Root | 1.467 |
| SRR9715743 | Root | 1.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.532 |
| SRR8749028 | MeJA induced 9h | 5.184 |
| SRR8749029 | MeJA induced 9h | 4.958 |
| SRR8749030 | Uninduced | 1.460 |
| SRR8749031 | Uninduced | 0.073 |
| SRR8749032 | Uninduced | 1.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.672 |
| SRR8400027 | Control - Root | 6.881 |