Gene detail information of Glyur000051s00003439 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43950.1 | 0 | Plant protein of unknown function (DUF946) |
| NR | KHN25608.1 | 0 | hypothetical protein glysoja_018182 [Glycine soja] |
| trEMBL | tr|I1LG17|I1LG17_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G01390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 307618 | 309945 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003439.1 | PF06101.6 | DUF946 | 46 | 603 | 2.90E-242 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.923 |
| SRR1783600 | control | 10.961 |
| SRR1783602 | moderate drought stress | 12.229 |
| SRR1811619 | moderate drought stress | 12.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.049 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.933 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.967 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.914 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.810 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.588 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.624 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.215 |
| SRR2868004 | Drought Stress (root) | 15.726 |
| SRR2967015 | Control (root) | 12.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.913 |
| SRR9715740 | Leaf | 1.627 |
| SRR9715741 | Leaf | 2.096 |
| SRR9715739 | Root | 5.121 |
| SRR9715742 | Root | 10.087 |
| SRR9715743 | Root | 9.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.410 |
| SRR8749028 | MeJA induced 9h | 2.143 |
| SRR8749029 | MeJA induced 9h | 1.441 |
| SRR8749030 | Uninduced | 0.456 |
| SRR8749031 | Uninduced | 0.296 |
| SRR8749032 | Uninduced | 0.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.561 |
| SRR8400027 | Control - Root | 32.989 |