Gene detail

Gene detail information of Glyur000051s00003412.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G16800.2	1.00E-92	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	XP_003537743.1	4.50E-162	PREDICTED: histone acetyltransferase MCC1-like isoform X1 [Glycine max]
COG	YP_001013176.1	4.00E-10	acetyltransferase [Hyperthermus butylicus DSM 5456]
Swissprot	tr\|Q9M8T9\|MCC1_ARATH	2.00E-97	Histone acetyltransferase MCC1
trEMBL	tr\|I1LFY4\|I1LFY4_SOYBN	2.00E-162	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G01170.5}

Sequence

Transcript Sequence

>Glyur000051s00003412.1
ATGTACTATGTGAATGGGGGACGGTCTCCTTGCTCACCATTAGAGCTTCTCTCTGCAATAGTAAGTTACATGAGGAGTGGCTTTAAGTCAGTGGCTGCCAAGCTGTACAAGAACGAAGGCAGGAAGATCTCAAGGCGGGCAAAGTGTAAAGAAAGCCATTCTCTTGTGTCAGCACCAACACAAAACAAAAGAAACTTGGCAGTCGAGTGTACTGAGCGAAGGCATCGCATTTCATTGGCGAGCAGAGCAGAGCAGAGCAGAGCAATCACTGTGGACTCCATGGTAAACCCGAAACTGTCTAGTCAGTCTAAAATATGCTACAGGCCTATACGACCTTCTGACCTCGACGTTTTAGAGCGTATTCATAGTACACTATTTCCCATCAGGTATGAATCTGCTTTTTTCCAAGATGTGGTAAATGGACGTGACATTGTGTCATGGGGAGCAGTTGACTGTAGTCGGCCAAATGGCCAAAGTGATGAACTCNTCGGATTTGTAACAGCACGGGTTGTTCTTGCTAAAGAAAGTGAGATAGTGGATATGCTTGGACATGACTCAGCCAAATCTGATCAAACTTTAGTGTACATTCTAACACTGGGAGTAGTGGAAGCATATAGGAGTCTTGGAATAGCTTCTTCTCTGATTCGGGAGGTCATAAAATACGCTTCAAGTATTCCAACCTGCCGAGCGGTTTACTTGCATGTAATTTCTTACAATAACCCAGCAATCAATTTATACAAGAAAATATCTTTCAAGTGTGTTAGAAGGCTGCGTGGATTTTATTTTATCAATGGTCAACATTATGATTCATATTTATTCATGTACTATGTGAATGGGGGACGGTCTCCTTGCTCACCATTAGAGCTTCTCTCTGCAATAGTAAGNTACATGAGGAGTGGCTTTAAGTCAGTGGCTGCCAAGCTGTACAAGAACGAAGGCAGGAAGATCTCAAGGCGGGCAAAGTGTAAAGAAAGCCATTCTCTTGTGTCAGCACCAACACAAAACAAAAGAAACTTGGCAGTCGAGTGTACTGGTTATGAGTGTTTTTCTGTTTCCTGTAGCATTCAACCTCACTCATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00051	153362	157706	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000051s00003412.1	PF00583.19	Acetyltransf_1	160	252	4.40E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.044
SRR1783600	control	15.168
SRR1783602	moderate drought stress	14.751
SRR1811619	moderate drought stress	14.052

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.690
DRR006520	Root Summer glycyrrhizin high producing strain	22.574
DRR006521	Root Winter glycyrrhizin high producing strain	16.299
DRR006522	Root Winter glycyrrhizin high producing strain	18.685
DRR006523	Root Summer glycyrrhizin low producing strain	31.122
DRR006524	Root Summer glycyrrhizin low producing strain	31.159
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.215
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.390

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.954
SRR2868004	Drought Stress (root)	28.920
SRR2967015	Control (root)	26.144

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.356
SRR9715740	Leaf	14.161
SRR9715741	Leaf	14.061
SRR9715739	Root	2.610
SRR9715742	Root	9.834
SRR9715743	Root	8.664

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.484
SRR8749028	MeJA induced 9h	27.200
SRR8749029	MeJA induced 9h	26.799
SRR8749030	Uninduced	47.583
SRR8749031	Uninduced	47.191
SRR8749032	Uninduced	27.593

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.700
SRR8400027	Control - Root	27.268