Gene detail

Gene detail information of Glyur000051s00003408

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G02930.1	1.00E-147	Plant protein of unknown function (DUF827)
NR	XP_004511414.1	0	PREDICTED: WEB family protein At5g16730, chloroplastic-like [Cicer arietinum]
Swissprot	tr\|Q9LFE4\|Y5673_ARATH	0	WEB family protein At5g16730, chloroplastic (Precursor)
trEMBL	tr\|G7K555\|G7K555_MEDTR	0	WEB family plant protein {ECO:0000313\|EMBL:AES93774.1}

Sequence

Transcript Sequence

>Glyur000051s00003408.1
GGCTTTGACAGATTTTAGAAAACTGAGGGTTACTTTTGTCCATTCACCCTCCTCCTCCCCCTCCCCACCCACCTGAAGAAGATATACACAAACAAACTACTACTGTACTGCTGTGGCCTGTGAGAGTATGATGAGAGTAGAAAGAGTGAAGGAAATGGGTAATAAGAGAGAGAAATAGTGAGTGAGTGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGTGGTTTTTGTGTGGCCACTCTGGAGACAGGAAAACCAACTAAATTTATTTGGTTTTGGTTTATGTTTTTGTGAAATCCTCTCCTTCCATCAATCCTCTCCTTCCCATAATTTCCCATAAAAGAAAGAAAAAGAAAACAAATTTGATTTTTGCTTACTCTGATCCCAAATGTGTTCAGTCTGACAATGTTGGANCTCCAGCATTCCCAATCCTGTAACTGACACTTTGAGGAGCAAAGGCTACACCTTTGTCGTNTACTTGGTTTCTCTCTGCCACCCTTCACCATGGCTTCTTCAAAATCCAGATCCAATTTAGCTGAAACACCCAACAAGGCACCACCGGCTACTCCCAACAAAGCACCACCAGCAGCAACTCTCAACAAAGCACCACCAGCAACTCCTAACAAAGCATCACCTGCAACTCCAAGAGGTAGTAGACTCAGCAGAGGAGTATCAAAACCAGAATCTGAGTCATCGCCATCCCCTTTGCAAAATTTGCGCCTTTCTGCGGAAAAATCGCCACNATCGGTGAATTCAAAGCCAATTGCTGACCGGAAATCACCAAGACCCACCACCCCAGCTGATAAGCAACCCCCAAGAGCTGCAAAGGGTTCAGAATTGCAGACCCAGTTAAACCTCGCTCAAGAAGATCTAAAGAAAGCAAAGGAACAGCTGATTCAGGCTGAGAAAGAGAAGGCAAAAGCAATAAATGAGCTGAAAGAAGCACAGAGAGTGGCCGAGGAAGCAAATGAGAAACTTAGGGAGGCAATGGTGGCTCAGAAGCGGGCTGAGGAGGATTCTGAGATTGAGAAGTTCCGAGCTGTTGAGTTGGAACAGGCTGGAATTGAAGCTGCTCAGAAGAAGGAAGAGGAGTGGCAGAAAGAACTTGAGAATGTGAGGAACCAGCATGCTTTGGATGTGTCCGCTCTTCTCTCCACCACTCAGGAGCTTCAGCGGGTTAAGCAAGAACTTGTCATGACTTGTGATGCAAAGAACCAGGCATTGAGTCATGCTGATGATGCNACTAAAATTGCTGAGCTTCATGTGGAGAAAGCGGAGATTCTTTCAGCTGAACTGACACGCTTGAAGGCCTTACTAGATTCAAAGCTGGAAANGGAAGCTAGTGAAAACAAGATTGTACTGAAGCTGCAAGCAGAGATAGAAGCTCTTAAGCAAGAACTTGAAAAGGCAAAGGGTTATGACGAAAAGTTGACAGAGAAAGAGACTTATATCGAACAGCTTAATGTGGAGGTTGAAGCTGCAAAGATGGCTGAATCTTATGCCCGTAGTGTGTTAGAGGAGTGGAGCAAAAAGGTTGAGGAACTAGAAATGAAGGTTGAAGAAGCAAACAAATTAGAGAGATCTGTGTCACTTTCTTTGGATTCTGTAACGAAACAGCTAGAAGGAAAAAATGAATTGTTGCNTGATGCAGAATCTGAAATTTCTAGTCTTAAAGAGAAGGTGGGATTGTTGGAAATGACAATTGGGAGGCAAAGAGGAGACCTTGAGGATTCGGAGCGTTGTCTTCTTGTGGCCAAGGAAGAAAGCCTTCAAATGTCAAAGAAGATTGAATCTCTCAAATCTGAACTTGAGACAGTTAATCAAGAGAAGGCTCAGGCTTTGAACAAGGAAAATCTTGCAGCTTCAAGTGCGCAGACCCTATTAGAAGAGAAAAACAAACTTATCAATGAATTGGAGATTTCTAGAGATGAAGAAGAAAAGACCAAAAAGGCNATGGAAGGCTTAACTTCTGCATTACATGAAGTGGCTGCAGAAGCTAGAGATGCCAAAGAAAAACTGTTAGCCAGTCATGCTGAACATGAAAGCTATGAGACCCAGATTGAAGATTTAAAGCTGGTATTAAAAGCTAGTAATGAAAAATACGAGTCTATGCTTAATGATGCACGGCATGAGATTGATGTTCTTACGAGTAGTGTTGANAATTCTAAGAACGATATTGAGAAATCCAAGGAAGAGTGGGAGCAGAGAGAGCTTCATCTTGTCAGCAGCTTAAAGCAAACCGAAGAAGAACACTCATCCCTTGGAAAAGAAGTTAATAGATTGATTCATTTACTGAAAGAAACCGAGGAAGAAGCTAGTGCCAAGAGAGAGGAGGAAGCCCAACTGAANGAAAATCTGAAGGAAGTCGAGGCTGAGGTGATCCACCTGCAGGAAGCACTCAAAGAAGNGCAGGCGGAAAACATGAAGTTGAAGGAGAGTTTATTGGATAAAGAAAATGAGTTTCAGAATATTTTCCAAGAAAATGAGGAACTCCGATCTCATGAATCCGCATCTATTAAGAAGGTAGAGGAGTTATCTAAGTTGCTCGAAGAAGCTACANCCCGAAACCAGACCAAGGAAAATGGGGATCTTACTGACAGCGAGAAGGACTACGATTTGCTTCCTAAAGTAGTCGAGTTCTCCGAAGAGAATGGACACGGAGGAGGAGAAGACAACATATCCAAGGGGGGAGAGCTTTCGGCCAACGGAGGACTCAGACAAAGCTTACAGGAAGAAAACATTCTCCTGAATGATNAGAAGTCTGAAGAAAAGGTTGAATCTCCCAAAGCTGAGAATGTGAATGGAAAACTGAAGGAAGAAAATGTGGGGAAGGGAAAAGATGATTCATTTGAATTCAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGGACCAGGACCAGAACCAGAACCAGAGGCTGAATCCTTTGAAGAGGAAGTTGAGTCAAAGACAGAAGGTGGTGGTGAGGACCACACAAATGGAGCCTCTTCTGTAACTGTAACAGAGAACACTGATGATGGTGGTGGGAGCTCACCATCAAAGCAGCAACAAGTGATGAAGAAGAAGAAGAAGCCTTTGCTTGGCAAGTTTGGAAGCCTGCTCAAGAAAAAGGGTGGTAGCAACCACAAATAGAACAACCCAACAAATACTTTTTTTCACTTTGGCAGGTATATTAATTGAACATTAAAATCGTTTGCACGTTATTTGCTTTGTTATGNTTTTTGCTTCTTGGAATGGAATAGCTTTTGAAGAATGAAGAAGAGGCTTTGTAATATTGTTTAGGATTTTCTTCTCTAATCACTTCTTTTTGGGTTGCAATTCTCCATGTTGGCAATGTGATGGAATTATTGTTATTATTTTTTCTCCAATATATTTTGCNTTTGCCCCTTGTCCCTCCTATTCCTATATAGATTTGACCAAGGAATTAGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00051	118390	122816	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000051s00003408.1	PF05701.6	WEMBL	110	540	2.30E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	39.614
SRR1783600	control	39.681
SRR1783602	moderate drought stress	27.913
SRR1811619	moderate drought stress	27.878

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	40.353
DRR006520	Root Summer glycyrrhizin high producing strain	39.807
DRR006521	Root Winter glycyrrhizin high producing strain	15.334
DRR006522	Root Winter glycyrrhizin high producing strain	14.900
DRR006523	Root Summer glycyrrhizin low producing strain	35.185
DRR006524	Root Summer glycyrrhizin low producing strain	34.948
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.508
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.428

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	77.359
SRR2868004	Drought Stress (root)	66.824
SRR2967015	Control (root)	75.688

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	15.393
SRR9715740	Leaf	10.566
SRR9715741	Leaf	7.998
SRR9715739	Root	1.946
SRR9715742	Root	14.023
SRR9715743	Root	10.854

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	44.883
SRR8749028	MeJA induced 9h	36.694
SRR8749029	MeJA induced 9h	26.159
SRR8749030	Uninduced	13.269
SRR8749031	Uninduced	9.133
SRR8749032	Uninduced	7.917

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	46.872
SRR8400027	Control - Root	55.627