Gene detail information of Glyur000051s00003397 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64980.1 | 3.00E-129 | Nucleotide-diphospho-sugar transferases superfamily protein |
| NR | XP_003517559.1 | 1.08E-180 | PREDICTED: uncharacterized protein LOC100798782 [Glycine max] |
| COG | YP_001368976.1 | 2.00E-87 | hypothetical protein Oant_0416 [Ochrobactrum anthropi ATCC 49188] |
| trEMBL | tr|I1JAP5|I1JAP5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 73196 | 73984 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 62.804 |
| SRR1783600 | control | 62.754 |
| SRR1783602 | moderate drought stress | 23.737 |
| SRR1811619 | moderate drought stress | 22.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 94.476 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 99.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.818 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.808 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 93.843 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 85.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 70.052 |
| SRR2868004 | Drought Stress (root) | 46.649 |
| SRR2967015 | Control (root) | 68.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 314.681 |
| SRR9715740 | Leaf | 206.138 |
| SRR9715741 | Leaf | 332.146 |
| SRR9715739 | Root | 217.004 |
| SRR9715742 | Root | 288.728 |
| SRR9715743 | Root | 264.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 156.355 |
| SRR8749028 | MeJA induced 9h | 218.175 |
| SRR8749029 | MeJA induced 9h | 283.239 |
| SRR8749030 | Uninduced | 159.521 |
| SRR8749031 | Uninduced | 98.713 |
| SRR8749032 | Uninduced | 220.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 60.549 |
| SRR8400027 | Control - Root | 121.231 |