Gene detail information of Glyur000051s00003391 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34160.1 | 8.00E-28 | Alba DNA/RNA-binding protein |
| NR | XP_004511396.1 | 1.12E-52 | PREDICTED: uncharacterized protein At2g34160-like [Cicer arietinum] |
| Swissprot | tr|O22969|Y2416_ARATH | 2.00E-34 | Uncharacterized protein At2g34160 |
| trEMBL | tr|I1JAQ0|I1JAQ0_SOYBN | 4.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 47141 | 48536 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003391.1 | PF01918.16 | Alba | 27 | 76 | 9.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.627 |
| SRR1783600 | control | 0.583 |
| SRR1783602 | moderate drought stress | 1.204 |
| SRR1811619 | moderate drought stress | 1.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.508 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.560 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.891 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.486 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.947 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.803 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.692 |
| SRR2868004 | Drought Stress (root) | 1.799 |
| SRR2967015 | Control (root) | 1.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.184 |
| SRR9715740 | Leaf | 1.250 |
| SRR9715741 | Leaf | 1.390 |
| SRR9715739 | Root | 1.845 |
| SRR9715742 | Root | 1.864 |
| SRR9715743 | Root | 2.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.518 |
| SRR8749028 | MeJA induced 9h | 0.234 |
| SRR8749029 | MeJA induced 9h | 0.429 |
| SRR8749030 | Uninduced | 0.529 |
| SRR8749031 | Uninduced | 0.069 |
| SRR8749032 | Uninduced | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.975 |
| SRR8400027 | Control - Root | 6.166 |