Gene detail information of Glyur000051s00003387 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05450.2 | 2.00E-23 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_004511392.1 | 2.65E-92 | PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1LE35|I1LE35_SOYBN | 8.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G39190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 40599 | 41637 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003387.1 | PF14368.1 | LTP_2 | 18 | 114 | 5.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.943 |
| SRR1783600 | control | 32.562 |
| SRR1783602 | moderate drought stress | 31.427 |
| SRR1811619 | moderate drought stress | 30.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.323 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.069 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.846 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.164 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.817 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 136.482 |
| SRR2868004 | Drought Stress (root) | 61.168 |
| SRR2967015 | Control (root) | 82.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.039 |
| SRR9715740 | Leaf | 1.073 |
| SRR9715741 | Leaf | 3.038 |
| SRR9715739 | Root | 64.445 |
| SRR9715742 | Root | 22.314 |
| SRR9715743 | Root | 27.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.439 |
| SRR8749028 | MeJA induced 9h | 0.437 |
| SRR8749029 | MeJA induced 9h | 0.649 |
| SRR8749030 | Uninduced | 9.468 |
| SRR8749031 | Uninduced | 27.417 |
| SRR8749032 | Uninduced | 6.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 116.560 |
| SRR8400027 | Control - Root | 78.468 |