Gene detail information of Glyur000051s00003383 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05470.1 | 0 | DNAse I-like superfamily protein |
| NR | XP_006573866.1 | 0 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9LR47|IP5P3_ARATH | 0 | Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 |
| trEMBL | tr|I1JAQ6|I1JAQ6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44570.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 21786 | 26978 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003383.1 | PF03372.18 | Exo_endo_phos | 272 | 510 | 1.40E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.279 |
| SRR1783600 | control | 1.390 |
| SRR1783602 | moderate drought stress | 2.005 |
| SRR1811619 | moderate drought stress | 1.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.712 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.655 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.338 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.327 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.428 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.848 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.933 |
| SRR2868004 | Drought Stress (root) | 5.905 |
| SRR2967015 | Control (root) | 6.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.109 |
| SRR9715740 | Leaf | 6.693 |
| SRR9715741 | Leaf | 5.599 |
| SRR9715739 | Root | 0.181 |
| SRR9715742 | Root | 1.100 |
| SRR9715743 | Root | 1.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.998 |
| SRR8749028 | MeJA induced 9h | 1.089 |
| SRR8749029 | MeJA induced 9h | 0.377 |
| SRR8749030 | Uninduced | 0.611 |
| SRR8749031 | Uninduced | 0.298 |
| SRR8749032 | Uninduced | 0.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.122 |
| SRR8400027 | Control - Root | 4.718 |