Gene detail information of Glyur000050s00005737 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03350.1 | 2.00E-55 | Protein of unknown function, DUF538 |
| NR | XP_004508709.1 | 1.27E-108 | PREDICTED: uncharacterized protein At5g01610-like [Cicer arietinum] |
| Swissprot | tr|Q9M015|Y5161_ARATH | 4.00E-55 | Uncharacterized protein At5g01610 |
| trEMBL | tr|V7CD36|V7CD36_PHAVU | 8.00E-107 | Uncharacterized protein {ECO:0000313|EMBL:ESW27268.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 436170 | 437879 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000050s00005737.1 | PF04398.7 | DUF538 | 55 | 164 | 7.90E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.166 |
| SRR1783600 | control | 0.169 |
| SRR1783602 | moderate drought stress | 1.179 |
| SRR1811619 | moderate drought stress | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.926 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.969 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.469 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.155 |
| SRR2868004 | Drought Stress (root) | 2.236 |
| SRR2967015 | Control (root) | 0.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.007 |
| SRR9715740 | Leaf | 0.776 |
| SRR9715741 | Leaf | 0.294 |
| SRR9715739 | Root | 0.068 |
| SRR9715742 | Root | 0.953 |
| SRR9715743 | Root | 1.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.184 |
| SRR8749028 | MeJA induced 9h | 0.268 |
| SRR8749029 | MeJA induced 9h | 0.094 |
| SRR8749030 | Uninduced | 0.308 |
| SRR8749031 | Uninduced | 0.201 |
| SRR8749032 | Uninduced | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.433 |
| SRR8400027 | Control - Root | 5.359 |