Gene detail information of Glyur000050s00005722 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26580.1 | 1.00E-55 | |
| NR | XP_007138262.1 | 1.17E-140 | hypothetical protein PHAVU_009G193800g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LDD4|ARID2_ARATH | 1.00E-21 | AT-rich interactive domain-containing protein 2 |
| trEMBL | tr|V7B1C1|V7B1C1_PHAVU | 4.00E-141 | Uncharacterized protein {ECO:0000313|EMBL:ESW10256.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 327282 | 332673 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.409 |
| SRR1783600 | control | 0.379 |
| SRR1783602 | moderate drought stress | 1.686 |
| SRR1811619 | moderate drought stress | 1.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.154 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.782 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 65.032 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 64.330 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.674 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.115 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.017 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.069 |
| SRR2868004 | Drought Stress (root) | 13.207 |
| SRR2967015 | Control (root) | 13.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.143 |
| SRR9715740 | Leaf | 4.434 |
| SRR9715741 | Leaf | 0.234 |
| SRR9715739 | Root | 0.054 |
| SRR9715742 | Root | 0.022 |
| SRR9715743 | Root | 0.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.482 |
| SRR8749028 | MeJA induced 9h | 93.808 |
| SRR8749029 | MeJA induced 9h | 51.885 |
| SRR8749030 | Uninduced | 86.572 |
| SRR8749031 | Uninduced | 282.654 |
| SRR8749032 | Uninduced | 170.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.574 |
| SRR8400027 | Control - Root | 0.696 |