Gene detail

Gene detail information of Glyur000050s00005719.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G07920.1	0	diacylglycerol kinase1
NR	KEH32000.1	0	diacylglycerol kinase domain protein [Medicago truncatula]
COG	YP_003251160.1	7.00E-08	diacylglycerol kinase catalytic subunit [Fibrobacter succinogenes subsp. succinogenes S85]
Swissprot	tr\|Q39017\|DGK1_ARATH	0	Diacylglycerol kinase 1
trEMBL	tr\|A0A072V1K2\|A0A072V1K2_MEDTR	0	Diacylglycerol kinase {ECO:0000256\|RuleBase:RU361128}

Sequence

Transcript Sequence

>Glyur000050s00005719.1
ANTGAATTCAATTTCGGCTTTTTGATAAGTATTTACCTTTCTTCCCTATGAAGGAAAAGCTACGTTCTGTCGTGGGATTTGCTCTCACGCATTCCATCTTTCTCTTTTTGGTAGTTTCGCTTCATCTCTAACTATAACTCTCTCTCTCTCGATCAACTAGGGTTTGTTTCCACCCGTTAGGTTGATATCGATCTCGCTGGCGCAACCGCAACTATATCCTCTACATGCTTGTCGTTCATACCCTTACTGGGGCTTGTTGTAAACTTGAAGTTAGCAAACAGAGATTTAACAGAAGATGCTTTGGAGAAAAATTGGGGATGAGGAGTGGCTTTCTTGTTCAATATGTCTTGTGAGAGAAGCAAGGTTGAGTAGTTATGTATTAAACAGCATTTCATTGCCTATATATGAATTTTGGTTTGAAGAATGAGACACATGAGGCATAATGTCATAATAATGTTATTTGTACACCAAGAGGTTTATGTACTTAGTTAGGCATTTGTCAGAGTTAACTTGGTTTGCCACGACCAAGCAAGTTCCACTGCCAATACGGGTGTAGCCTTTAGAATTATATAGTTGAGGAATGGATGATGACAGGGATTTTGAGTTGTTTCTTCACAGTTGGAATACCAAGAATCCAACTGATCGGATTTTCATTATATCTTGCTTCGTCGCTGCCCTTGTTGGAATTTTGACCATAGCCTACACGGCCTTTCAGTGGAGGAGAAACATTAATCTTAGTTGGATGAAAGCCATAGCTAGGTCTAAGAAAAACCCAAAGGCAAGGCACAAAGTCCCTGTGGCCCCTCATACTTGGGGTCTAGAATCTGCATCTCGTGCGAAGAATTTAAACTGCTGTGTATGCTTTAAGTCCATGTCACCCTCTCAAACTCTAGGGCCTATGGTAGCTTCAGACAGTTTTATCCACCGGTGCTGTATTTGTGGTGCAGTAGCTCATCTAAGCTGTTCTTCTAGTGCCCACAAGGACTGTAAGTGCGTTTCAATGATTGGATATGAGCATGTCATGCACCAGTGGGCTGTTCGTTGGACAGATGTAGCTGACCAGCCTGATGAAACTGCTTTCTGTAGTTACTGTGAAGAGCCATGCGGTGGGACGTTCCTCAGTGGTTCCCCTATATGGTCTTGCCTGTGGTGCCAACGTTTAGTACATGTTGATTGTCATAGTACATTGTCTAATGAAACAGGTGATATATGTGACTTGGGCCCGTTTAAAAGATTAATACTGTCACCACTGTATGTGAAGGAATTGAACTGGAACTTGCCAGGTGGATTTTTTAGCTCAATTACTCACGGTGCAAATGAGATAGCATCTTCAGTTCGGGCAAGTATCAGCAGGAGCCAGAGCAAAAAGTACAAGCATGGAAATGAGCCATTGGTTGAATCTGGGAATAGTGAGAGCATTGGTGAAACATCCACAGAAAGCACTGCCACAGAAAGCACTGGTGATTCTCATCAAATAGTTAATGGTCACCATGAAGTTGAGGAAAAAAATAGTGTTGGCTCAAATAAAGAGGTTCAACATCACGATAGTGAATTAGATAATAAGATGGACAGAAAACCCAGTTTTAGACGCAATTCATCTATCAATCAGAAGGATGAGTCCCACGTGTTAGGAGTGAAACAGAAATACGAGTTGACTGGTTTGCCTCCAGATGCAAGACCATTGTTAGTTTTTGTAAACAAGAAGAGTGGTGCCCAGCGAGGAGACTCACTTAGGCTGCGTCTGAATATTCTATTAAATCCTGTNCAGGTGTTTGAATTGAGCTCATCACAGGGGCCAGAGATGGGACTTTATATGTTTAGAAAGGTGCCTCACTTCAGAGTTCTTGTATGTGGCGGAGATGGTACTGTTGGTTGGGTCCTGAATGCAATAGACAAGCAAAATTTTGATTCCCCTCCCCCAGTTGCTATTCTTCCTGCTGGTACAGGAAATGATCTTGCTAGAGTTCTCTCTTGGGGAAGTGGCTTGGGTCCAGTGGAGAGGCAAGGGGGTCTTAGCACAATTCTGCATCACATAGAACATGCTGCAGTTACTATTCTTGACCGGTGGAAGGTAACAATCAGTAATCCACAAGGAAAACAACAGCTCCAACCACCAAAGTTTATGAACAATTATCTTGGAATTGGTTGTGATGCAAAGGTTGCTTTGGACATCCATAATATGCGGGAGGAGAATCCAGAGAAGTTTTATAACCAGTTTATGAATAAAGTTCTATATGCAAGAGAAGGTGCTAAAAGCATTATGGATAGGACTTTTGAGGATTTTCCTTGGCAGATTCGAGTTGAGGTGGATGGAGTTGAAATTGAGGTCCCTGAGGATGCTGAAGGTGTGCTTGTTGCAAATATTGGAAGCTACATGGGAGGTGTAGATTTGTGGCAAAATGAGGATGATAATTATGACAATTTTGATCCACAATCTATGCATGATAAGATACTTGAAGTCGTGAGCATATCTGGAACATGGCACCTTGGGAAGCTTCAGGTTGGGCTTTCTCGAGCTCGAAGACTTGCACAAGGACAGTCAATTAAGATACAATTGTTTGCTAAGTTTCCAGTTCAAATTGATGGAGAACCTTGGTTTCAGCAACCCTGTACAATTTCCATAGCCCATCATGGCCAGGCCTTCATGTTGAAGAGGGCGGCTGAGGAACCTCTTGGTCATGCAGCTGCAATAATCACTGATGTGCTTGAGAATGCTGAAACCAATAATGTAATTAATGCTTCACAAAAGCGGGCTCTTCTTCATGAAATGGCACTGAGGCTGTCCTAGAAATTTTCTCCTTTCCACCCTGTGATTAGAGATCTTGTAGCAGTTATTTTGAGTAAATATCTTACACACTTCGTGTATAACTTTTCCTTTTTAGAACTTCTGTGCAAACTTCCCGCTGCTTCTGAAGCAGGCTTGTATATTANGAATCTTATACGTCAAGAGAAAGAATGATATCAGAAAGCTTCTAAGTTGATTTTGTCAAATTCCATAGGTGTTGGAACACATACAGCATATNCAGTCATTTGTATGAATTCCTTTGTGAGGAGATGATTATTATTTTACNACTTCTATCGAAGGAAAAGAGTACAAGCTGTCATAGATCTTATTGAACAGAATATTGCTGCAAAATNTAAAATATTGCCTTATTTGAATTGATCTTTAGATCGGGACATGAAGATTTGGTATTACCTTTGCATAAAGATTGGCTTTTGACTCTTACTATGTACAAAAAGACCTTGTTAATTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00050	308488	315194	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00901	dgkA, DGK	EC:2.7.1.107	Glycerolipid metabolism	map00561
			Glycerophospholipid metabolism	map00564
			Phosphatidylinositol signaling system	map04070
			Phospholipase D signaling pathway	map04072
			Choline metabolism in cancer	map05231

Gene Ontology

biological_process

GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway

GO:0035556 intracellular signal transduction

molecular_function

GO:0004143 diacylglycerol kinase activity

GO:0016301 kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000050s00005719.1	PF00130.17	C1_1	149	209	2.40E-12
Glyur000050s00005719.1	PF00781.19	DAGK_cat	367	496	4.90E-29
Glyur000050s00005719.1	PF00609.14	DAGK_acc	514	671	2.00E-55

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.664
SRR1783600	control	10.659
SRR1783602	moderate drought stress	9.837
SRR1811619	moderate drought stress	9.740

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.621
DRR006520	Root Summer glycyrrhizin high producing strain	14.396
DRR006521	Root Winter glycyrrhizin high producing strain	16.276
DRR006522	Root Winter glycyrrhizin high producing strain	15.908
DRR006523	Root Summer glycyrrhizin low producing strain	19.387
DRR006524	Root Summer glycyrrhizin low producing strain	19.419
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.692
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.383

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.326
SRR2868004	Drought Stress (root)	28.887
SRR2967015	Control (root)	28.589

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.349
SRR9715740	Leaf	17.159
SRR9715741	Leaf	15.201
SRR9715739	Root	4.346
SRR9715742	Root	15.917
SRR9715743	Root	11.926

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.428
SRR8749028	MeJA induced 9h	10.501
SRR8749029	MeJA induced 9h	8.694
SRR8749030	Uninduced	11.636
SRR8749031	Uninduced	10.735
SRR8749032	Uninduced	11.393

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.334
SRR8400027	Control - Root	21.522