Gene detail information of Glyur000050s00005707 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006600577.1 | 1.73E-114 | PREDICTED: uncharacterized protein LOC100798071 isoform X1 [Glycine max] |
| trEMBL | tr|K7MKH9|K7MKH9_SOYBN | 6.00E-115 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G08600.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 197181 | 198675 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.754 |
| SRR1783600 | control | 1.671 |
| SRR1783602 | moderate drought stress | 3.921 |
| SRR1811619 | moderate drought stress | 4.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.532 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.521 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.195 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.035 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.500 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.641 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.939 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.273 |
| SRR2868004 | Drought Stress (root) | 3.902 |
| SRR2967015 | Control (root) | 2.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.362 |
| SRR9715740 | Leaf | 17.326 |
| SRR9715741 | Leaf | 9.686 |
| SRR9715739 | Root | 0.302 |
| SRR9715742 | Root | 1.069 |
| SRR9715743 | Root | 0.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.570 |
| SRR8749028 | MeJA induced 9h | 1.861 |
| SRR8749029 | MeJA induced 9h | 1.053 |
| SRR8749030 | Uninduced | 0.888 |
| SRR8749031 | Uninduced | 1.453 |
| SRR8749032 | Uninduced | 2.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.129 |
| SRR8400027 | Control - Root | 1.340 |