Gene detail information of Glyur000050s00005687 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACR34457.1 | 2.63E-10 | unknown [Zea mays] |
| trEMBL | tr|T1MG01|T1MG01_TRIUA | 3.00E-11 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_16644-P1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 94187 | 98711 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000050s00005687.1 | PF07673.9 | DUF1602 | 78 | 105 | 3.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.959 |
| SRR1783600 | control | 5.801 |
| SRR1783602 | moderate drought stress | 5.421 |
| SRR1811619 | moderate drought stress | 5.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.407 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.270 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.842 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.825 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.956 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.327 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.827 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.664 |
| SRR2868004 | Drought Stress (root) | 1.692 |
| SRR2967015 | Control (root) | 3.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.105 |
| SRR9715740 | Leaf | 1.051 |
| SRR9715741 | Leaf | 1.284 |
| SRR9715739 | Root | 0.902 |
| SRR9715742 | Root | 2.453 |
| SRR9715743 | Root | 1.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.579 |
| SRR8749028 | MeJA induced 9h | 0.968 |
| SRR8749029 | MeJA induced 9h | 0.417 |
| SRR8749030 | Uninduced | 0.215 |
| SRR8749031 | Uninduced | 0.043 |
| SRR8749032 | Uninduced | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.926 |
| SRR8400027 | Control - Root | 3.945 |