Gene detail information of Glyur000050s00005675 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G08100.1 | 8.00E-128 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| NR | KEH32053.1 | 0 | isoaspartyl peptidase/L-asparaginase [Medicago truncatula] |
| COG | YP_003084682.1 | 1.00E-87 | peptidase T2 asparaginase 2 [Dyadobacter fermentans DSM 18053] |
| Swissprot | tr|P50288|ASPG_LUPAL | 0 | Isoaspartyl peptidase/L-asparaginase subunit beta (Precursor) |
| trEMBL | tr|A0A072USJ6|A0A072USJ6_MEDTR | 0 | Isoaspartyl peptidase/L-asparaginase {ECO:0000313|EMBL:KEH32053.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 15509 | 18987 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000050s00005675.1 | PF01112.13 | Asparaginase_2 | 1 | 319 | 8.60E-130 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 114.917 |
| SRR1783600 | control | 115.605 |
| SRR1783602 | moderate drought stress | 70.788 |
| SRR1811619 | moderate drought stress | 70.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.392 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.916 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 43.876 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.361 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.324 |
| SRR2868004 | Drought Stress (root) | 54.957 |
| SRR2967015 | Control (root) | 47.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.541 |
| SRR9715740 | Leaf | 17.151 |
| SRR9715741 | Leaf | 16.704 |
| SRR9715739 | Root | 82.062 |
| SRR9715742 | Root | 133.060 |
| SRR9715743 | Root | 129.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.857 |
| SRR8749028 | MeJA induced 9h | 28.678 |
| SRR8749029 | MeJA induced 9h | 22.326 |
| SRR8749030 | Uninduced | 30.792 |
| SRR8749031 | Uninduced | 25.040 |
| SRR8749032 | Uninduced | 18.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 178.509 |
| SRR8400027 | Control - Root | 205.173 |