Gene detail information of Glyur000050s00005671


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60850.11.00E-36OBF binding protein 4
NRXP_004508651.12.26E-122PREDICTED: dof zinc finger protein DOF5.4-like [Cicer arietinum]
Swissprottr|Q8LDR0|DOF54_ARATH7.00E-56Dof zinc finger protein DOF5.4
trEMBLtr|V7CE95|V7CE95_PHAVU4.00E-110Uncharacterized protein {ECO:0000313|EMBL:ESW27196.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold000502621215+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005671.1PF02701.10zf-Dof37972.20E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.163
SRR1783600control19.840
SRR1783602moderate drought stress33.904
SRR1811619moderate drought stress33.735

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.798
DRR006520Root Summer glycyrrhizin high producing strain22.364
DRR006521Root Winter glycyrrhizin high producing strain26.017
DRR006522Root Winter glycyrrhizin high producing strain24.993
DRR006523Root Summer glycyrrhizin low producing strain14.326
DRR006524Root Summer glycyrrhizin low producing strain14.183
DRR006525Leaf Summer glycyrrhizin high producing strain13.481
DRR006526Leaf Summer glycyrrhizin high producing strain16.085

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)6.863
SRR2868004Drought Stress (root)9.868
SRR2967015Control (root)9.233

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf14.878
SRR9715740Leaf12.647
SRR9715741Leaf10.480
SRR9715739Root34.909
SRR9715742Root48.352
SRR9715743Root40.888

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.853
SRR8749028MeJA induced 9h0.376
SRR8749029MeJA induced 9h0.789
SRR8749030Uninduced0.097
SRR8749031Uninduced0.037
SRR8749032Uninduced0.137

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root21.944
SRR8400027Control - Root17.866

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved