Gene detail information of Glyur000049s00003165.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G62420.12.00E-37basic region/leucine zipper motif 53
NRXP_007163175.12.16E-80hypothetical protein PHAVU_001G212800g [Phaseolus vulgaris]
Swissprottr|P24068|OCS1_MAIZE3.00E-30Ocs element-binding factor 1
trEMBLtr|V7CYK3|V7CYK3_PHAVU8.00E-81Uncharacterized protein {ECO:0000313|EMBL:ESW35169.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00049388958389626-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000049s00003165.1PF00170.16bZIP_122764.60E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control112.637
SRR1783600control106.884
SRR1783602moderate drought stress102.899
SRR1811619moderate drought stress102.464

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain105.287
DRR006520Root Summer glycyrrhizin high producing strain107.869
DRR006521Root Winter glycyrrhizin high producing strain52.023
DRR006522Root Winter glycyrrhizin high producing strain48.106
DRR006523Root Summer glycyrrhizin low producing strain61.089
DRR006524Root Summer glycyrrhizin low producing strain58.829
DRR006525Leaf Summer glycyrrhizin high producing strain95.194
DRR006526Leaf Summer glycyrrhizin high producing strain97.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)79.426
SRR2868004Drought Stress (root)191.174
SRR2967015Control (root)103.162

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf367.959
SRR9715740Leaf324.448
SRR9715741Leaf468.540
SRR9715739Root148.377
SRR9715742Root155.336
SRR9715743Root154.732

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h222.309
SRR8749028MeJA induced 9h255.469
SRR8749029MeJA induced 9h271.095
SRR8749030Uninduced279.529
SRR8749031Uninduced588.852
SRR8749032Uninduced477.618

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root120.609
SRR8400027Control - Root115.886

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved