Gene detail information of Glyur000049s00003158 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47360.1 | 2.00E-37 | |
| NR | XP_003625976.1 | 3.95E-107 | hypothetical protein MTR_7g109590 [Medicago truncatula] |
| trEMBL | tr|G7KSU3|G7KSU3_MEDTR | 1.00E-107 | Transmembrane protein, putative {ECO:0000313|EMBL:AES82194.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00049 | 343162 | 344085 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.464 |
| SRR1783600 | control | 3.384 |
| SRR1783602 | moderate drought stress | 1.777 |
| SRR1811619 | moderate drought stress | 1.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.057 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.089 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.031 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.485 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.386 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.050 |
| SRR2868004 | Drought Stress (root) | 7.767 |
| SRR2967015 | Control (root) | 5.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.635 |
| SRR9715740 | Leaf | 0.474 |
| SRR9715741 | Leaf | 0.170 |
| SRR9715739 | Root | 2.720 |
| SRR9715742 | Root | 4.409 |
| SRR9715743 | Root | 3.654 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.503 |
| SRR8749028 | MeJA induced 9h | 21.914 |
| SRR8749029 | MeJA induced 9h | 33.503 |
| SRR8749030 | Uninduced | 5.760 |
| SRR8749031 | Uninduced | 37.405 |
| SRR8749032 | Uninduced | 72.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.459 |
| SRR8400027 | Control - Root | 13.822 |