Gene detail

Gene detail information of Glyur000049s00003157.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G34830.1	2.00E-31	WRKY DNA-binding protein 35
NR	XP_006604744.1	4.12E-142	PREDICTED: probable WRKY transcription factor 35 [Glycine max]
Swissprot	tr\|O64747\|WRK35_ARATH	3.00E-36	Probable WRKY transcription factor 35
trEMBL	tr\|I1NBD2\|I1NBD2_SOYBN	2.00E-142	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G40470.1}

Sequence

Transcript Sequence

>Glyur000049s00003157.1
CAGCTTTATATTAAATGAGTGAAAAGAAAGAGAGAAAGCAACTTGGGAAAAGCTTTGCCATTATCANACTCTCTTTCTCTATCTAATTAATCCGACCTCTGATTTTGATCCACTTGCCTCTGAGAACTCCATACCACACAGGTCAAGCTTGCAGCAAGCAAGAGACTGAAAAGAGGTGCACAGCTATGGACAGTAATGCCTCCCCCCAACTTGAGTCAGAAGAAGCATCTTCAGAGCTCAAATCAGAAACTCAAGCATCCAAGAAAAGGAAAATGGTGCAGAAAACAGTAGTAGCTGTGAGGATAGGAGAGAATGTTAGCAAGATNAAGAATGAAGGGCTACCTTCTGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGGTCTCCATATCCAAGAGGGTATTATAGGTGCAGCACATCCAAGGGGTGTTCGGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATCATCACCTACACCTCTACACATAACCATCCAGGTCCCACTTCCCTCTCCACCACAAATTTACCCCAGCAACCAAAAGAATCAGAAACCGAAGAAACCACTGAAGACCCCCCAGTTACCTCAAAGGAAGAAGANCAACAAGAACAGATAGAAGAAGAGGAAATGAATAAGAAGCACAATCACAATGTGAGCAGTGATGAAGGTATAAATGAAGAAAATTTTCATTACTTGCAATCTCCAATATGCTGCTCCGAGAACATCATCATTATAGACCAAGAAGATCCTTTCAAATTAAACACGGAAAAAAGCCATGACAGAATAGACAATCTTGTCCTAGAGGAAGAGCCACTCTGCTATGCACAGTTGAAGAACTTGTCAGATTCCAAATCAGAAGAACTTGACTTTTTCGATGAGCTTGAGGAGCTACCCATGCCTTCATCTTTCTTACAATTTACGAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGATTAATTCAAGTGTTTTTTCTTGTGATTGCGTGTCACCTAGAAGAATGTAAGTTGTTTGTAACTAGTGTATTGTGAATACATGACATGCCTACATGATCTAGATATCCACTTCAGCTAGTTTTTCAATTCAGAATCTTTCTTTTCTTTAGTTTACTTTATTTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00049	338349	340129	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000049s00003157.1	PF03106.10	WRKY	54	112	7.10E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	35.002
SRR1783600	control	35.236
SRR1783602	moderate drought stress	56.556
SRR1811619	moderate drought stress	56.036

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.667
DRR006520	Root Summer glycyrrhizin high producing strain	8.549
DRR006521	Root Winter glycyrrhizin high producing strain	3.044
DRR006522	Root Winter glycyrrhizin high producing strain	2.832
DRR006523	Root Summer glycyrrhizin low producing strain	11.853
DRR006524	Root Summer glycyrrhizin low producing strain	11.930
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.861
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.260

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.261
SRR2868004	Drought Stress (root)	24.552
SRR2967015	Control (root)	26.355

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.896
SRR9715740	Leaf	12.861
SRR9715741	Leaf	7.482
SRR9715739	Root	4.203
SRR9715742	Root	12.187
SRR9715743	Root	10.956

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.504
SRR8749028	MeJA induced 9h	6.959
SRR8749029	MeJA induced 9h	16.527
SRR8749030	Uninduced	10.522
SRR8749031	Uninduced	28.539
SRR8749032	Uninduced	20.877

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.275
SRR8400027	Control - Root	27.925