Gene detail information of Glyur000049s00003123 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19240.1 | 2.00E-18 | Vacuolar import/degradation, Vid27-related protein |
| NR | XP_004505213.1 | 4.74E-32 | PREDICTED: protein CYPRO4-like [Cicer arietinum] |
| Swissprot | tr|P40781|CYPR4_CYNCA | 4.00E-17 | Protein CYPRO4 |
| trEMBL | tr|G7JL95|G7JL95_MEDTR | 4.00E-31 | Vacuolar import/degradation, VID27-like protein {ECO:0000313|EMBL:AES90182.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00049 | 126961 | 127194 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.256 |
| SRR1783600 | control | 3.518 |
| SRR1783602 | moderate drought stress | 18.539 |
| SRR1811619 | moderate drought stress | 19.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.528 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.158 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.784 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.140 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.916 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.991 |
| SRR2868004 | Drought Stress (root) | 5.606 |
| SRR2967015 | Control (root) | 5.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.993 |
| SRR9715740 | Leaf | 4.576 |
| SRR9715741 | Leaf | 1.917 |
| SRR9715739 | Root | 14.733 |
| SRR9715742 | Root | 4.885 |
| SRR9715743 | Root | 6.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.628 |
| SRR8749028 | MeJA induced 9h | 6.590 |
| SRR8749029 | MeJA induced 9h | 1.489 |
| SRR8749030 | Uninduced | 1.031 |
| SRR8749031 | Uninduced | 0.505 |
| SRR8749032 | Uninduced | 1.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.326 |
| SRR8400027 | Control - Root | 6.991 |