Gene detail information of Glyur000049s00003117 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47115.1 | 6.00E-30 | |
| NR | XP_007163220.1 | 4.68E-115 | hypothetical protein PHAVU_001G216300g [Phaseolus vulgaris] |
| trEMBL | tr|V7D139|V7D139_PHAVU | 2.00E-115 | Uncharacterized protein {ECO:0000313|EMBL:ESW35215.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00049 | 94311 | 98988 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.272 |
| SRR1783600 | control | 45.034 |
| SRR1783602 | moderate drought stress | 97.032 |
| SRR1811619 | moderate drought stress | 96.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.712 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.146 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.129 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 68.539 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 69.911 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.499 |
| SRR2868004 | Drought Stress (root) | 32.698 |
| SRR2967015 | Control (root) | 37.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.725 |
| SRR9715740 | Leaf | 27.453 |
| SRR9715741 | Leaf | 18.812 |
| SRR9715739 | Root | 53.829 |
| SRR9715742 | Root | 21.792 |
| SRR9715743 | Root | 28.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.326 |
| SRR8749028 | MeJA induced 9h | 29.016 |
| SRR8749029 | MeJA induced 9h | 38.442 |
| SRR8749030 | Uninduced | 15.481 |
| SRR8749031 | Uninduced | 8.260 |
| SRR8749032 | Uninduced | 20.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.257 |
| SRR8400027 | Control - Root | 33.264 |