Gene detail information of Glyur000049s00003104 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62190.1 | 2.00E-36 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003626043.1 | 1.84E-68 | DnaJ [Medicago truncatula] |
| COG | YP_002431950.1 | 1.00E-06 | heat shock protein DnaJ domain-containing protein, partial [Desulfatibacillum alkenivorans AK-01] |
| trEMBL | tr|A4PU34|A4PU34_MEDTR | 7.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:AFK45140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00049 | 29126 | 32035 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000049s00003104.1 | PF00226.26 | DnaJ | 10 | 54 | 6.90E-05 |
| Glyur000049s00003104.2 | PF00226.26 | DnaJ | 10 | 61 | 1.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.859 |
| SRR1783600 | control | 14.183 |
| SRR1783602 | moderate drought stress | 18.743 |
| SRR1811619 | moderate drought stress | 17.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.736 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.948 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.434 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.535 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.957 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.580 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.172 |
| SRR2868004 | Drought Stress (root) | 15.798 |
| SRR2967015 | Control (root) | 11.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.413 |
| SRR9715740 | Leaf | 32.505 |
| SRR9715741 | Leaf | 24.286 |
| SRR9715739 | Root | 3.635 |
| SRR9715742 | Root | 5.639 |
| SRR9715743 | Root | 3.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.745 |
| SRR8749028 | MeJA induced 9h | 9.780 |
| SRR8749029 | MeJA induced 9h | 7.417 |
| SRR8749030 | Uninduced | 13.412 |
| SRR8749031 | Uninduced | 7.619 |
| SRR8749032 | Uninduced | 6.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.763 |
| SRR8400027 | Control - Root | 20.599 |