Gene detail information of Glyur000048s00002263 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39380.1 | 2.00E-46 | |
| NR | XP_004503992.1 | 0 | PREDICTED: TSL-kinase interacting protein 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8LJT8|TKI1_ARATH | 1.00E-46 | TSL-kinase interacting protein 1 |
| trEMBL | tr|I3T608|I3T608_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK47950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 384024 | 388169 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.771 |
| SRR1783600 | control | 1.759 |
| SRR1783602 | moderate drought stress | 2.438 |
| SRR1811619 | moderate drought stress | 2.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.310 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.316 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.860 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.802 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.509 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.555 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.360 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.446 |
| SRR2868004 | Drought Stress (root) | 11.640 |
| SRR2967015 | Control (root) | 10.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.002 |
| SRR9715740 | Leaf | 2.202 |
| SRR9715741 | Leaf | 3.118 |
| SRR9715739 | Root | 0.252 |
| SRR9715742 | Root | 1.192 |
| SRR9715743 | Root | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.459 |
| SRR8749028 | MeJA induced 9h | 20.798 |
| SRR8749029 | MeJA induced 9h | 15.853 |
| SRR8749030 | Uninduced | 17.573 |
| SRR8749031 | Uninduced | 27.570 |
| SRR8749032 | Uninduced | 14.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.715 |
| SRR8400027 | Control - Root | 8.527 |