Gene detail information of Glyur000048s00002262 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09830.1 | 2.00E-47 | Uncharacterised conserved protein UCP009193 |
| NR | XP_004503996.1 | 2.78E-142 | PREDICTED: uncharacterized protein LOC101509322 [Cicer arietinum] |
| trEMBL | tr|G7LBD4|G7LBD4_MEDTR | 5.00E-142 | Holocarboxylase synthetase {ECO:0000313|EMBL:AET04614.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 377397 | 382529 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 148.028 |
| SRR1783600 | control | 148.867 |
| SRR1783602 | moderate drought stress | 218.482 |
| SRR1811619 | moderate drought stress | 217.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 177.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 175.021 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 138.835 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 134.531 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 236.888 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 236.166 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.404 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 73.134 |
| SRR2868004 | Drought Stress (root) | 99.481 |
| SRR2967015 | Control (root) | 101.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.571 |
| SRR9715740 | Leaf | 28.067 |
| SRR9715741 | Leaf | 32.690 |
| SRR9715739 | Root | 87.121 |
| SRR9715742 | Root | 72.009 |
| SRR9715743 | Root | 77.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 103.317 |
| SRR8749028 | MeJA induced 9h | 68.981 |
| SRR8749029 | MeJA induced 9h | 91.163 |
| SRR8749030 | Uninduced | 102.186 |
| SRR8749031 | Uninduced | 137.540 |
| SRR8749032 | Uninduced | 123.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.975 |
| SRR8400027 | Control - Root | 55.508 |